DiPhyx Stories
Filtered by software_and_toolsBoltz-1
Boltz-1 is a state-of-the-art open-source model for predicting biomolecular structures, including combinations of proteins, RNA, DNA, covalent ligands, and glycans. It supports modified residues and allows conditioning on specific interaction pockets or contacts. Released under the MIT license, Boltz-1 is free for academic and commercial use.
JupyterLab vs. Notebook: Key Differences & Guide
Choosing the Right Tool for Your Data Science and Research Workflows
Volume Rendering in ParaView - DiPhyx Scientific Computing
The fundamentals of volume rendering in ParaView, practical steps and tips to help you effectively visualize your volumetric datasets.
Data Probing in ParaView
How to effectively use ParaView's data probing tools to extract and analyze specific data points, lines, and surfaces within datasets
Open Source VS Proprietary CFD Software
A concise comparison of open-source versus proprietary CFD software, highlighting key advantages, disadvantages, and examples.
AMBER vs GROMACS
Comparing AMBER and GROMACS: Key strengths and best use cases for molecular dynamics simulations
Guide to Loading Genomes in IGV
Explore how to load genome in IGV and how DiPhyx can optimize your IGV projects
Energy Minimization in AMBER
Understanding Amber Relaxation and Energy Minimization in AMBER: A Key Step in Molecular Dynamics