FileGatorFileGator is a free, open-source, self-hosted web application for managing files and folders. You can manage files inside your local repository folder (on your server's hard drive) or connect to other storage adapters.
SamtoolsA versatile suite of tools for processing and analyzing genomic data, particularly optimized for high-throughput sequencing data in SAM, BAM, and CRAM formats.
PangolinPangolin (Phylogenetic Assignment of Named Global Outbreak LINeages) is an open-source bioinformatics tool specifically developed for classifying SARS-CoV-2 virus samples into specific lineages.
LAMMPSLAMMPS is an open-source software package designed for molecular dynamics simulations. It implements multi-machine parallel computing using MPI and provides empirical potential functions for atoms in the periodic table.
GROMACSRenowned for efficiently simulating biomolecules such as proteins, lipids, and nucleic acids, GROMACS is an indispensable tool in fields like biophysics, pharmacology, and biochemistry.
FastQC-CLIFastQC is a program designed to spot potential problems in high throughput sequencing datasets. This is the Command Line Interface (CLI) version of FastQC
BLASTBLAST (Basic Local Alignment Search Tool) is a pivotal tool in bioinformatics, facilitating fast and accurate comparison of query sequences against extensive databases of known sequences.
BWABWA (Burrows-Wheeler Aligner) is a widely used and efficient open-source software tool designed for the alignment of high-throughput sequencing reads to a reference genome.
Jupyter Lab
Jupyter Lab is an open-source web-based interactive development environment (IDE) for data scientists and researchers. It provides a flexible and powerful environment for working with code, data, and visualizations.
ParaViewParaView is an open-source, multi-platform data analysis and visualization application. It allows users to interactively visualize and analyze large datasets using a distributed computing architecture.
FileGatorFileGator is a free, open-source, self-hosted web application for managing files and folders. You can manage files inside your local repository folder (on your server's hard drive) or connect to other storage adapters.
Uintah-WasatchWasatch is an advanced multi-physics simulation software that provides high-fidelity solutions for fluid dynamics and reactive transport processes across various engineering and scientific applications.
ODT The One-Dimensional Turbulence (ODT) model is a computationally efficient simulation approach that simplifies turbulent flow dynamics to one dimension using stochastic triplet maps, enabling detailed insights into turbulent energy transfer and dissipat...
SU2A robust open-source CFD code, is primarily developed for aerospace and other engineering applications. Renowned for its flexibility, it caters to a broad spectrum of flow problems.
Jupyter Lab
Jupyter Lab is an open-source web-based interactive development environment (IDE) for data scientists and researchers. It provides a flexible and powerful environment for working with code, data, and visualizations.
ParaViewParaView is an open-source, multi-platform data analysis and visualization application. It allows users to interactively visualize and analyze large datasets using a distributed computing architecture.
FileGatorFileGator is a free, open-source, self-hosted web application for managing files and folders. You can manage files inside your local repository folder (on your server's hard drive) or connect to other storage adapters.
SU2A robust open-source CFD code, is primarily developed for aerospace and other engineering applications. Renowned for its flexibility, it caters to a broad spectrum of flow problems.
SamtoolsA versatile suite of tools for processing and analyzing genomic data, particularly optimized for high-throughput sequencing data in SAM, BAM, and CRAM formats.
PangolinPangolin (Phylogenetic Assignment of Named Global Outbreak LINeages) is an open-source bioinformatics tool specifically developed for classifying SARS-CoV-2 virus samples into specific lineages.
LAMMPSLAMMPS is an open-source software package designed for molecular dynamics simulations. It implements multi-machine parallel computing using MPI and provides empirical potential functions for atoms in the periodic table.
GROMACSRenowned for efficiently simulating biomolecules such as proteins, lipids, and nucleic acids, GROMACS is an indispensable tool in fields like biophysics, pharmacology, and biochemistry.
FastQC-CLIFastQC is a program designed to spot potential problems in high throughput sequencing datasets. This is the Command Line Interface (CLI) version of FastQC
BLASTBLAST (Basic Local Alignment Search Tool) is a pivotal tool in bioinformatics, facilitating fast and accurate comparison of query sequences against extensive databases of known sequences.
BWABWA (Burrows-Wheeler Aligner) is a widely used and efficient open-source software tool designed for the alignment of high-throughput sequencing reads to a reference genome.
Jupyter Lab
Jupyter Lab is an open-source web-based interactive development environment (IDE) for data scientists and researchers. It provides a flexible and powerful environment for working with code, data, and visualizations.
ParaViewParaView is an open-source, multi-platform data analysis and visualization application. It allows users to interactively visualize and analyze large datasets using a distributed computing architecture.
FileGatorFileGator is a free, open-source, self-hosted web application for managing files and folders. You can manage files inside your local repository folder (on your server's hard drive) or connect to other storage adapters.
UbuntuUbuntu is a popular Linux distribution that is widely used for desktop and server applications. It is known for its ease of use, stability, and large software repository.
Jupyter Lab
Jupyter Lab is an open-source web-based interactive development environment (IDE) for data scientists and researchers. It provides a flexible and powerful environment for working with code, data, and visualizations.